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An Empirical Study of Global Descriptors for Image-based Localization in Dense Urban Scenes
Fadi Dornaika
,
Ammar Assoum
,
Abdelmalik Moujahid
,
Ignacio Arganda-Carreras
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DOI
MorphoLibJ: integrated library and plugins for mathematical morphology with ImageJ
Motivation: Mathematical morphology provides many powerful operators for processing 2D and 3D images. However, most mathematical …
David Legland
,
Ignacio Arganda-Carreras
,
Philippe Andrey
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DOI
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A temporally consistent grid-based visual odometry framework for multi-core architectures
Leonardo De-Maeztu
,
Unai Elordi
,
Marcos Nieto
,
Javier Barandiarán
,
Oihana Otaegui
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DOI
URL
Crowdsourcing the creation of image segmentation algorithms for connectomics
To stimulate progress in automating the reconstruction of neural circuits, we organized the first international challenge on 2D …
Ignacio Arganda-Carreras
,
Srinivas C Turaga
,
Daniel R Berger
,
Dan Ciresan
,
Alessandro Giusti
,
Luca Maria Gambardella
,
Jürgen Schmidhuber
,
Dmitry Laptev
,
Sarvesh Dwivedi
,
Joachim M Buhmann
,
Ting Liu
,
Mojtaba Seyedhosseini
,
Tolga Tasdizen
,
Lee Kamentsky
,
Radim Burget
,
Vaclav Uher
,
Xiao Tan
,
Cangming Sun
,
Tuan Pham
,
Erhan Bas
,
Mustafa Gokhan Uzunbas
,
Albert Cardona
,
Johannes Schindelin
,
H. Sebastian Seung
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DOI
URL
Mapping Social Behavior-Induced Brain Activation at Cellular Resolution in the Mouse
Yongsoo Kim
,
Kannan Umadevi Venkataraju
,
Kith Pradhan
,
Carolin Mende
,
Julian Taranda
,
Srinivas C Turaga
,
Ignacio Arganda-Carreras
,
Lydia Ng
,
Michael J Hawrylycz
,
Kathleen S Rockland
,
H Sebastian Seung
,
Pavel Osten
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DOI
NucleusJ: an ImageJ plugin for quantifying 3D images of interphase nuclei
Axel Poulet
,
Ignacio Arganda-Carreras
,
David Legland
,
Aline v Probst
,
Philippe Andrey
,
Christophe Tatout
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DOI
Phenotyping nematode feeding sites: three-dimensional reconstruction and volumetric measurements of giant cells induced by root-knot nematodes in Arabidopsis
Javier Cabrera
,
Fernando E. Díaz-Manzano
,
Marta Barcala
,
Ignacio Arganda-Carreras
,
Janice De Almeida-Engler
,
Gilbert Engler
,
Carmen Fenoll
,
Carolina Escobar
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DOI
URL
A generic classification-based method for segmentation of nuclei in 3D images of early embryos
Jaza Gul-Mohammed
,
Ignacio Arganda-Carreras
,
Philippe Andrey
,
Vincent Galy
,
Thomas Boudier
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DOI
Fiji: an open-source platform for biological-image analysis
Fiji is a distribution of the popular open-source software ImageJ focused on biological-image analysis. Fiji uses modern software …
Johannes Schindelin
,
Ignacio Arganda-Carreras
,
Erwin Frise
,
Verena Kaynig
,
Mark Longair
,
Tobias Pietzsch
,
Stephan Preibisch
,
Curtis Rueden
,
Stephan Saalfeld
,
Benjamin Schmid
,
Jean-Yves Tinevez
,
Daniel James White
,
Volker Hartenstein
,
Kevin Eliceiri
,
Pavel Tomancak
,
Albert Cardona
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DOI
TrakEM2 Software for Neural Circuit Reconstruction
A key challenge in neuroscience is the expeditious reconstruction of neuronal circuits. For model systems such as
Drosophila
and
C. …
, Albert and Saalfeld, , Stephan and Schindelin, , Johannes and Arganda-Carreras, , Ignacio and Preibisch, , Stephan and Longair, , Mark and Tomancak, , Pavel and Hartenstein, , Volker and Douglas, , Rodney J. Cardona
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